4.3 Zooplankton
The Ocean's Grazers
Zooplankton are heterotrophic organisms in the plankton, ranging from single-celled protists (2-200 mum) to large jellyfish (meters). They are the critical link between primary producers and higher trophic levels (fish, whales, seabirds). Their grazing controls phytoplankton biomass, and their fecal pellets contribute significantly to the vertical flux of carbon to the deep ocean (biological pump).
Copepods are the most abundant multicellular animals on Earth, with an estimated 10²¹ individuals globally. Krill (Euphausiidae) form enormous swarms in polar waters and underpin some of the ocean's most productive food webs. Diel vertical migration (DVM) by zooplankton is the largest synchronized animal movement on the planet.
Major Zooplankton Groups
Copepods
1-5 mm. Most abundant metazoans. Calanus, Acartia, Oithona. Herbivorous, omnivorous, or carnivorous. Sophisticated feeding currents detect individual phytoplankton cells. Lipid-rich nauplii are critical food for larval fish. 10,000+ species described.
Krill (Euphausiids)
1-6 cm. Antarctic krill (Euphausia superba) has biomass ~500 Mt—one of the most abundant animal species. Filter-feed on diatoms. Form swarms of 10,000-30,000 individuals/m³. Keystone prey for whales, seals, penguins, fish, and seabirds.
Salps & Larvaceans
Gelatinous tunicates. Salps filter vast volumes of water and produce fast-sinking fecal pellets, efficiently exporting carbon. Larvaceans build mucus "houses" that filter particles; discarded houses sink rapidly. Both increasingly recognized as major players in the biological pump.
Jellyfish & Gelatinous Zooplankton
Cnidarians (true jellyfish), ctenophores (comb jellies), siphonophores. Blooms increasing due to overfishing and warming. Low nutritional value but high biomass. Can dominate ecosystems when fish are removed (trophic cascades).
Grazing Functional Responses (Holling Types)
The functional response describes how the per-capita ingestion rate of a predator varies with prey density. Three types are commonly used in marine ecosystem models:
Type I (Linear)
$G = a \cdot P$
Ingestion rate increases linearly with prey density. No saturation. Unrealistic at high densities but simple. Used for filter feeders at low concentrations.
Type II (Saturating)
$G = \frac{g_{\max} P}{K_P + P}$
Most commonly used. Saturates at high prey density due to handling time limitation.$K_P$ = half-saturation, $g_{\max}$ = maximum rate.
Type III (Sigmoidal)
$G = \frac{g_{\max} P^2}{K_P^2 + P^2}$
Low ingestion at low prey density (prey switching, refuge effect). Stabilizes predator-prey oscillations. Used for omnivorous zooplankton.
Diel Vertical Migration (DVM)
DVM is the largest animal migration on Earth by biomass. Every day, zooplankton ascend hundreds of meters to feed at the surface at night and descend to depth during the day to avoid visual predators. This migration transports an estimated 1-3 Gt C/yr to depth through respiration and excretion at depth ("active flux"):
$$F_{\text{active}} = B_{\text{migrant}} \cdot (r_{\text{deep}} \cdot t_{\text{deep}}) \cdot f_{\text{metabolic}}$$
$B_{\text{migrant}}$ = migrant biomass, $r_{\text{deep}}$ = respiration rate at depth,$t_{\text{deep}}$ = time at depth, $f_{\text{metabolic}}$ = fraction of ingested carbon respired/excreted
100-1000 m
Migration amplitude
1-3 Gt C/yr
Active carbon transport
24 hours
Full migration cycle
Zooplankton Biogeography & Egg Production
Zooplankton communities vary dramatically with latitude, temperature, and productivity regime. The egg production rate (EPR) of copepods is a key demographic parameter that links food availability to population growth:
$$\text{EPR} = \frac{N_{\text{eggs}}}{N_{\text{females}} \cdot \Delta t}$$
Units: eggs female⁻¹ day⁻¹. Typically 10-50 eggs/female/day for broadcast spawners. EPR correlates with food concentration following a saturating function.
Polar Communities
Dominated by large, lipid-rich copepods (Calanus spp.) and krill. Low species diversity but enormous biomass. Life cycles synchronized with seasonal blooms. Capital breeders (using stored lipids for reproduction).
Tropical Communities
High species diversity, low individual biomass. Small-bodied species with continuous reproduction (income breeders). Rapid turnover. Dominated by small copepods (Oithona), appendicularians, and diverse gelatinous forms.
Fecal Pellets, Lipid Storage & Overwintering
Fecal Pellet Flux
Zooplankton fecal pellets are dense, compact packages of organic matter that sink at 50-1000 m/day (much faster than individual phytoplankton cells at ~1 m/day). They contribute 10-40% of total particulate organic carbon (POC) export. Copepod pellets: ~100 m/day. Salp pellets: ~500-1000 m/day.
Lipid Storage & Overwintering
High-latitude copepods (Calanus spp.) accumulate lipid reserves (wax esters) during spring blooms, then descend to 500-1500 m for diapause (overwintering). They enter a state of near-zero metabolism for 6-9 months, surviving on stored lipids until the next bloom. This strategy sequesters carbon at depth.
Derivation: Holling Type II & III Functional Responses
Step 1: Time Budget for a Foraging Predator
Holling (1959) considered a predator that spends its time either searching for prey or handling (capturing, ingesting, digesting) prey. The total time T is partitioned as:
$$T = T_{\text{search}} + T_{\text{handle}}$$
Step 2: Express Encounters and Handling Time
During search time T_search, the predator encounters prey at rate a (attack rate) proportional to prey density P. Each prey item requires handling time t_h. The number of prey consumed N_e is:
$$N_e = a \cdot P \cdot T_{\text{search}}, \qquad T_{\text{handle}} = N_e \cdot t_h$$
Step 3: Solve for the Type II Response
Substituting T_search = T - N_e t_h into the encounter equation and solving for the per-capita ingestion rate G = N_e/T:
$$N_e = a P (T - N_e t_h) \quad \Rightarrow \quad N_e(1 + a P t_h) = a P T$$
$$\boxed{G = \frac{N_e}{T} = \frac{aP}{1 + aPt_h} = \frac{g_{\max} P}{K_P + P}}$$
where g_max = 1/t_h is the maximum ingestion rate (limited by handling time) and K_P = 1/(a t_h) is the half-saturation constant. This is the Michaelis-Menten form.
Step 4: Type III Response from Density-Dependent Attack Rate
The Type III response arises when the attack rate a itself increases with prey density (due to learning, prey switching, or increased search effort). Setting a = a₀P (linear increase with prey density):
$$G = \frac{a_0 P \cdot P}{1 + a_0 P \cdot P \cdot t_h} = \frac{a_0 P^2}{1 + a_0 t_h P^2} = \frac{g_{\max} P^2}{K_P^2 + P^2}$$
where K_P = 1/sqrt(a₀ t_h). The sigmoidal shape creates a prey refuge at low densities, which has a stabilizing effect on predator-prey dynamics.
Step 5: Verify Limiting Behavior
For both types, we check the limits. At low prey density (P much less than K_P), the Type II response is linear (G ~ aP) while Type III is quadratic (G ~ a₀P²). At high prey density (P much greater than K_P), both saturate at g_max:
$$\text{Type II: } \lim_{P \to \infty} G = g_{\max}, \qquad \text{Type III: } \lim_{P \to \infty} G = g_{\max}$$
Derivation: Lotka-Volterra Predator-Prey Dynamics
Step 1: Prey Growth and Predation Loss
Consider phytoplankton (prey P) growing exponentially at intrinsic rate r in the absence of grazing. Zooplankton (predator Z) consume prey at a rate proportional to the product of both populations (mass-action encounter rate aP Z):
$$\frac{dP}{dt} = rP - aPZ$$
Step 2: Predator Growth from Consumption
Zooplankton convert ingested prey into biomass with efficiency b (gross growth efficiency). In the absence of prey, zooplankton decline at mortality rate m:
$$\frac{dZ}{dt} = baPZ - mZ$$
Step 3: Find Equilibrium Points
Setting both derivatives to zero, the nontrivial equilibrium (coexistence) is:
$$P^* = \frac{m}{ba}, \qquad Z^* = \frac{r}{a}$$
Note that the equilibrium prey density depends on predator parameters (m, b, a) and the equilibrium predator density depends on prey growth rate r. This is the "paradox of enrichment" precursor.
Step 4: Prove Oscillatory Solutions (Conserved Quantity)
The classical Lotka-Volterra system has a conserved quantity (constant of motion) H. Dividing the two ODEs and separating variables:
$$\frac{dZ}{dP} = \frac{baPZ - mZ}{rP - aPZ} = \frac{Z(baP - m)}{P(r - aZ)}$$
$$H = -m\ln P + baP - r\ln Z + aZ = \text{const}$$
Since H is conserved, orbits in the P-Z phase plane are closed curves. The populations oscillate with period T = 2pi/sqrt(rm), and the predator cycle lags the prey cycle by a quarter period.
Step 5: Period and Phase Relationship
Linearizing around the equilibrium (P*, Z*) by setting P = P* + p, Z = Z* + z and keeping first-order terms yields:
$$\frac{d^2p}{dt^2} + rm\,p = 0 \quad \Rightarrow \quad \omega = \sqrt{rm}, \quad T = \frac{2\pi}{\sqrt{rm}}$$
The oscillation period depends only on prey growth rate r and predator mortality m, not on the interaction strength a. This is a key prediction of the classical model.
Python: Holling Grazing, DVM & Lotka-Volterra
Python: Holling Grazing, DVM & Lotka-Volterra
Python!/usr/bin/env python3
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Code will be executed with Python 3 on the server
Fortran: Individual-Based Copepod Population Model
Fortran: Individual-Based Copepod Population Model
Fortran-------------------------------------------------------
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Code will be compiled with gfortran and executed on the server
Key Takeaways
- ▸Copepods are the most abundant metazoans; krill underpin polar food webs.
- ▸Holling Type II is the standard grazing model; Type III provides prey refuge effects.
- ▸DVM transports 1-3 Gt C/yr to depth, significantly contributing to the biological pump.
- ▸Fecal pellets sink 50-1000 m/day, far faster than individual phytoplankton.
- ▸High-latitude copepods store lipids and overwinter in diapause at 500-1500 m depth.